Projects
Graphlab Canvas
GraphLab Canvas is a visualization component, part of the original GraphLab Create machine learning toolkit. It included tools for general…
Clustered Stacks
Clustered Stacks enable multiple categorical data features to be grouped. Interactive functionality includes selection of “primary” groups of data. This…
Inspectra
Visual comparison of networks via Fiedler clustering.
Regulome Explorer (RE)
A window onto the analytical research and computation done by my colleagues.
Carve
A flexible two dimensional plotting tool written in Javascript.
CircVis
A Javascript implementation of the circular ideogram layout, as described in Edward Tufte’s book The Visual Display of Quantitative Information. Heavily inspired by the Circos tool by Martin Krzywinski.
Micro
Compare genomic measurement correlation with known biological relationships.
Colorectal Cancer Aggressiveness Explorer
A companion tool for part of the work published in the Nature paper “Comprehensive molecular characterization of human colon and…
ChromaVis
Validate peptide identification in spectrometry data
Transcriptional Regulation and Epigenetic Landscape (TREL)
A companion resource for the research “Gene-pair expression signatures reveal lineage control” published in Nature Methods (April 2013).
